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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs6879347 chr5:93925759 A/G 4.45E-5 404 14.78 17.73 9.8 KM Plot
LGG rs6880843 chr5:92804288 A/C 1.67E-5 407 15.17 16.17 18.57 KM Plot
LGG rs6893587 chr5:94000264 G/A 8.49E-5 400 14.78 17.9 8.47 KM Plot
LGG rs6894554 chr5:156007819 T/C 8.5E-5 404 14.93 16.03 11.63 KM Plot
LGG rs6900089 chr6:151851124 G/T 2.53E-8 407 15.47 14.95 3.77 KM Plot
LGG rs6908622 chr6:36053147 C/T 9.43E-10 406 15.67 15.15 6.15 KM Plot
LGG rs6908862 chr6:150202646 C/T 0.000211 402 14.77 17.75 17.03 KM Plot
LGG rs6910351 chr6:150198615 G/A 0.000165 407 14.77 17.73 17.03 KM Plot
LGG rs6910685 chr6:36048417 A/G 1.02E-9 405 15.67 15.13 6.15 KM Plot
LGG rs6911151 chr6:3038399 C/A 0.000182 395 17.28 14.47 11.17 KM Plot
LGG rs6914570 chr6:36061263 G/A 9.31E-10 407 15.63 15.15 6.15 KM Plot
LGG rs6916123 chr6:33806412 G/A 2.71E-5 405 15.3 17.23 11.42 KM Plot
LGG rs6916386 chr6:151853773 G/C 3.06E-8 395 15.78 14.95 3.77 KM Plot
LGG rs6917470 chr6:33815035 T/C 0.000195 405 15.3 14.8 16.37 KM Plot
LGG rs6921999 chr6:36019928 A/G 1.0E-9 406 15.67 14.95 6.15 KM Plot